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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832753.1_cds_XP_016505004.1_18385
CDS Infomation

[gene=LOC107822931] [db_xref=GeneID:107822931] [protein=polygalacturonase-like] [protein_id=XP_016505004.1] [location=join(9189..9623,10087..10376,11393..11618,12244..12471)] [gbkey=CDS]
Sequence

ATGGCCAACTTTAGAACATTTCTTTTGGCCCTAGTCTTCTTTTCTTTCATATCCTTATTT
CTGCCTTGTTGCTCAGCCTACAATGTGGTGAATTATGGAGCTAGGGGCGACGGGAGGACG
GACTCGACCACAGCGTTTCTTCGTGCCTGGTCGTCCGCCTGCAGCTCCACTAGCCCAGCT
AATGTTTATGTTCCTCGTGGAACGTTTTTGATAAGAACAGTGACTTTCACCGGCCCTTGC
CGGAGCAGAATTGAGTTCCGAGTAGATGGAACTCTTGTTGCTCCGGCAGATTATAACGCC
ATTGGCCATTCTGGGTTCTGGATTTTGTTTTATAAAGTTAGTAGGCTTTCTGTTTATGGT
GGAACCATTAATGCCCAAGGAAGTGCTTTTTGGTCGTGTCGTAAAGCTGGCCGTTCCTGC
CCCCAGGGAGCAAAGTCAATCTCATTCTTTTGGTGCGATGATGTACTGGTAAGTGGATTA
ACATCAGTGAATAGTCAAACAAAGCATGTGGGTATTGATTATAGCAGCCGTATTAGAGTT
GAGAATTTGAAAATAAGAGCTCCAAGTAGAAGCCCAAACACTGATGGAATTCATATAGAG
AATTCAAGAGGAGTTACCATCACAGGCAGCACCATCAAGACCGGAGATGACTGTATTTCC
ATTGGCCCTGGCTCCATGAACTTGTGGATTCAAGAAATTGGATGTGGCCCAGGACACGGC
ATCAGCATCGGAAGTTTGGGGAGCAGTAATAATGAAGCTGGAGTTGTGAATATAACAGTA
ACAAATTCGGTTTTCACAAAGACACAGAATGGTGTTAGAGTAAAGTCATGGGCAAGACCA
AGTGGTACCTATGCTAAGAATCTCATGTTCAGAAATCTTATAATGAGGAATGTTGGGTAC
CCCATAATCATTGACCAAAACTATTGCCCTGATAATAGTTGCCCTCATCAGAATTCAGGA
GTAAAGGTGAGTCAAGTAACATACAAGAATGTGAAAGGAACATCGTCCACACAAGTAGCC
TTGAAATTTGATTGCAGTTACACAAATCCATGCACCGGAATCAAACTGCAAGACATAAAG
CTTACTCACAATGATCGCCTAAGAAGACCAGCAATATCGTACTGTAGAAATGCAAGGGGA
AGACATAGCGGCACAGTCATTCCCAAGGGTTGCTTCTGA

Peptide Sequence

PEP ID

XP_016505004.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MANFRTFLLALVFFSFISLFLPCCSAYNVVNYGARGDGRTDSTTAFLRAWSSACSSTSPA
NVYVPRGTFLIRTVTFTGPCRSRIEFRVDGTLVAPADYNAIGHSGFWILFYKVSRLSVYG
GTINAQGSAFWSCRKAGRSCPQGAKSISFFWCDDVLVSGLTSVNSQTKHVGIDYSSRIRV
ENLKIRAPSRSPNTDGIHIENSRGVTITGSTIKTGDDCISIGPGSMNLWIQEIGCGPGHG
ISIGSLGSSNNEAGVVNITVTNSVFTKTQNGVRVKSWARPSGTYAKNLMFRNLIMRNVGY
PIIIDQNYCPDNSCPHQNSGVKVSQVTYKNVKGTSSTQVALKFDCSYTNPCTGIKLQDIK
LTHNDRLRRPAISYCRNARGRHSGTVIPKGCF

Transcript Sequence

Gene sequence data has not been registered.